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package org.eclipse.jgit.internal.storage.dfs;

import static org.eclipse.jgit.internal.storage.dfs.DfsObjDatabase.PackSource.COMPACT;
import static org.eclipse.jgit.internal.storage.dfs.DfsObjDatabase.PackSource.GC;
import static org.eclipse.jgit.internal.storage.pack.PackExt.INDEX;
import static org.eclipse.jgit.internal.storage.pack.PackExt.PACK;
import static org.eclipse.jgit.internal.storage.pack.PackExt.REFTABLE;
import static org.eclipse.jgit.internal.storage.pack.StoredObjectRepresentation.PACK_DELTA;

import java.io.IOException;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Set;

import org.eclipse.jgit.errors.IncorrectObjectTypeException;
import org.eclipse.jgit.internal.JGitText;
import org.eclipse.jgit.internal.storage.file.PackIndex;
import org.eclipse.jgit.internal.storage.file.PackReverseIndex;
import org.eclipse.jgit.internal.storage.pack.PackWriter;
import org.eclipse.jgit.internal.storage.reftable.ReftableCompactor;
import org.eclipse.jgit.internal.storage.reftable.ReftableConfig;
import org.eclipse.jgit.lib.AnyObjectId;
import org.eclipse.jgit.lib.NullProgressMonitor;
import org.eclipse.jgit.lib.ObjectId;
import org.eclipse.jgit.lib.ObjectIdSet;
import org.eclipse.jgit.lib.ProgressMonitor;
import org.eclipse.jgit.revwalk.RevFlag;
import org.eclipse.jgit.revwalk.RevObject;
import org.eclipse.jgit.revwalk.RevWalk;
import org.eclipse.jgit.storage.pack.PackConfig;
import org.eclipse.jgit.storage.pack.PackStatistics;
import org.eclipse.jgit.util.BlockList;
import org.eclipse.jgit.util.io.CountingOutputStream;

Combine several pack files into one pack.

The compactor combines several pack files together by including all objects contained in each pack file into the same output pack. If an object appears multiple times, it is only included once in the result. Because the new pack is constructed by enumerating the indexes of the source packs, it is quicker than doing a full repack of the repository, however the result is not nearly as space efficient as new delta compression is disabled.

This method is suitable for quickly combining several packs together after receiving a number of small fetch or push operations into a repository, allowing the system to maintain reasonable read performance without expending a lot of time repacking the entire repository.

/** * Combine several pack files into one pack. * <p> * The compactor combines several pack files together by including all objects * contained in each pack file into the same output pack. If an object appears * multiple times, it is only included once in the result. Because the new pack * is constructed by enumerating the indexes of the source packs, it is quicker * than doing a full repack of the repository, however the result is not nearly * as space efficient as new delta compression is disabled. * <p> * This method is suitable for quickly combining several packs together after * receiving a number of small fetch or push operations into a repository, * allowing the system to maintain reasonable read performance without expending * a lot of time repacking the entire repository. */
public class DfsPackCompactor { private final DfsRepository repo; private final List<DfsPackFile> srcPacks; private final List<DfsReftable> srcReftables; private final List<ObjectIdSet> exclude; private PackStatistics newStats; private DfsPackDescription outDesc; private int autoAddSize; private ReftableConfig reftableConfig; private RevWalk rw; private RevFlag added; private RevFlag isBase;
Initialize a pack compactor.
Params:
  • repository – repository objects to be packed will be read from.
/** * Initialize a pack compactor. * * @param repository * repository objects to be packed will be read from. */
public DfsPackCompactor(DfsRepository repository) { repo = repository; autoAddSize = 5 * 1024 * 1024; // 5 MiB srcPacks = new ArrayList<>(); srcReftables = new ArrayList<>(); exclude = new ArrayList<>(4); }
Set configuration to write a reftable.
Params:
  • cfg – configuration to write a reftable. Reftable compacting is disabled (default) when cfg is null.
Returns:this
/** * Set configuration to write a reftable. * * @param cfg * configuration to write a reftable. Reftable compacting is * disabled (default) when {@code cfg} is {@code null}. * @return {@code this} */
public DfsPackCompactor setReftableConfig(ReftableConfig cfg) { reftableConfig = cfg; return this; }
Add a pack to be compacted.

All of the objects in this pack will be copied into the resulting pack. The resulting pack will order objects according to the source pack's own description ordering (which is based on creation date), and then by the order the objects appear in the source pack.

Params:
  • pack – a pack to combine into the resulting pack.
Returns:this
/** * Add a pack to be compacted. * <p> * All of the objects in this pack will be copied into the resulting pack. * The resulting pack will order objects according to the source pack's own * description ordering (which is based on creation date), and then by the * order the objects appear in the source pack. * * @param pack * a pack to combine into the resulting pack. * @return {@code this} */
public DfsPackCompactor add(DfsPackFile pack) { srcPacks.add(pack); return this; }
Add a reftable to be compacted.
Params:
  • table – a reftable to combine.
Returns:this
/** * Add a reftable to be compacted. * * @param table * a reftable to combine. * @return {@code this} */
public DfsPackCompactor add(DfsReftable table) { srcReftables.add(table); return this; }
Automatically select pack and reftables to be included, and add them.

Packs are selected based on size, smaller packs get included while bigger ones are omitted.

Throws:
Returns:this
/** * Automatically select pack and reftables to be included, and add them. * <p> * Packs are selected based on size, smaller packs get included while bigger * ones are omitted. * * @return {@code this} * @throws java.io.IOException * existing packs cannot be read. */
public DfsPackCompactor autoAdd() throws IOException { DfsObjDatabase objdb = repo.getObjectDatabase(); for (DfsPackFile pack : objdb.getPacks()) { DfsPackDescription d = pack.getPackDescription(); if (d.getFileSize(PACK) < autoAddSize) add(pack); else exclude(pack); } if (reftableConfig != null) { for (DfsReftable table : objdb.getReftables()) { DfsPackDescription d = table.getPackDescription(); if (d.getPackSource() != GC && d.getFileSize(REFTABLE) < autoAddSize) { add(table); } } } return this; }
Exclude objects from the compacted pack.
Params:
  • set – objects to not include.
Returns:this.
/** * Exclude objects from the compacted pack. * * @param set * objects to not include. * @return {@code this}. */
public DfsPackCompactor exclude(ObjectIdSet set) { exclude.add(set); return this; }
Exclude objects from the compacted pack.
Params:
  • pack – objects to not include.
Throws:
Returns:this.
/** * Exclude objects from the compacted pack. * * @param pack * objects to not include. * @return {@code this}. * @throws java.io.IOException * pack index cannot be loaded. */
public DfsPackCompactor exclude(DfsPackFile pack) throws IOException { final PackIndex idx; try (DfsReader ctx = (DfsReader) repo.newObjectReader()) { idx = pack.getPackIndex(ctx); } return exclude(idx); }
Compact the pack files together.
Params:
  • pm – progress monitor to receive updates on as packing may take a while, depending on the size of the repository.
Throws:
/** * Compact the pack files together. * * @param pm * progress monitor to receive updates on as packing may take a * while, depending on the size of the repository. * @throws java.io.IOException * the packs cannot be compacted. */
public void compact(ProgressMonitor pm) throws IOException { if (pm == null) { pm = NullProgressMonitor.INSTANCE; } DfsObjDatabase objdb = repo.getObjectDatabase(); try (DfsReader ctx = objdb.newReader()) { if (reftableConfig != null && !srcReftables.isEmpty()) { compactReftables(ctx); } compactPacks(ctx, pm); List<DfsPackDescription> commit = getNewPacks(); Collection<DfsPackDescription> remove = toPrune(); if (!commit.isEmpty() || !remove.isEmpty()) { objdb.commitPack(commit, remove); } } finally { rw = null; } } private void compactPacks(DfsReader ctx, ProgressMonitor pm) throws IOException, IncorrectObjectTypeException { DfsObjDatabase objdb = repo.getObjectDatabase(); PackConfig pc = new PackConfig(repo); pc.setIndexVersion(2); pc.setDeltaCompress(false); pc.setReuseDeltas(true); pc.setReuseObjects(true); try (PackWriter pw = new PackWriter(pc, ctx)) { pw.setDeltaBaseAsOffset(true); pw.setReuseDeltaCommits(false); addObjectsToPack(pw, ctx, pm); if (pw.getObjectCount() == 0) { return; } boolean rollback = true; initOutDesc(objdb); try { writePack(objdb, outDesc, pw, pm); writeIndex(objdb, outDesc, pw); PackStatistics stats = pw.getStatistics(); outDesc.setPackStats(stats); newStats = stats; rollback = false; } finally { if (rollback) { objdb.rollbackPack(Collections.singletonList(outDesc)); } } } } private long estimatePackSize() { // Every pack file contains 12 bytes of header and 20 bytes of trailer. // Include the final pack file header and trailer size here and ignore // the same from individual pack files. long size = 32; for (DfsPackFile pack : srcPacks) { size += pack.getPackDescription().getFileSize(PACK) - 32; } return size; } private void compactReftables(DfsReader ctx) throws IOException { DfsObjDatabase objdb = repo.getObjectDatabase(); Collections.sort(srcReftables, objdb.reftableComparator()); try (ReftableStack stack = ReftableStack.open(ctx, srcReftables)) { initOutDesc(objdb); ReftableCompactor compact = new ReftableCompactor(); compact.addAll(stack.readers()); compact.setIncludeDeletes(true); writeReftable(objdb, outDesc, compact); } } private void initOutDesc(DfsObjDatabase objdb) throws IOException { if (outDesc == null) { outDesc = objdb.newPack(COMPACT, estimatePackSize()); } }
Get all of the source packs that fed into this compaction.
Returns:all of the source packs that fed into this compaction.
/** * Get all of the source packs that fed into this compaction. * * @return all of the source packs that fed into this compaction. */
public Collection<DfsPackDescription> getSourcePacks() { Set<DfsPackDescription> src = new HashSet<>(); for (DfsPackFile pack : srcPacks) { src.add(pack.getPackDescription()); } for (DfsReftable table : srcReftables) { src.add(table.getPackDescription()); } return src; }
Get new packs created by this compaction.
Returns:new packs created by this compaction.
/** * Get new packs created by this compaction. * * @return new packs created by this compaction. */
public List<DfsPackDescription> getNewPacks() { return outDesc != null ? Collections.singletonList(outDesc) : Collections.emptyList(); }
Get statistics corresponding to the getNewPacks(). May be null if statistics are not available.
Returns:statistics corresponding to the getNewPacks().
/** * Get statistics corresponding to the {@link #getNewPacks()}. * May be null if statistics are not available. * * @return statistics corresponding to the {@link #getNewPacks()}. * */
public List<PackStatistics> getNewPackStatistics() { return outDesc != null ? Collections.singletonList(newStats) : Collections.emptyList(); } private Collection<DfsPackDescription> toPrune() { Set<DfsPackDescription> packs = new HashSet<>(); for (DfsPackFile pack : srcPacks) { packs.add(pack.getPackDescription()); } Set<DfsPackDescription> reftables = new HashSet<>(); for (DfsReftable table : srcReftables) { reftables.add(table.getPackDescription()); } for (Iterator<DfsPackDescription> i = packs.iterator(); i.hasNext();) { DfsPackDescription d = i.next(); if (d.hasFileExt(REFTABLE) && !reftables.contains(d)) { i.remove(); } } for (Iterator<DfsPackDescription> i = reftables.iterator(); i.hasNext();) { DfsPackDescription d = i.next(); if (d.hasFileExt(PACK) && !packs.contains(d)) { i.remove(); } } Set<DfsPackDescription> toPrune = new HashSet<>(); toPrune.addAll(packs); toPrune.addAll(reftables); return toPrune; } private void addObjectsToPack(PackWriter pw, DfsReader ctx, ProgressMonitor pm) throws IOException, IncorrectObjectTypeException { // Sort packs by description ordering, this places newer packs before // older packs, allowing the PackWriter to be handed newer objects // first and older objects last. Collections.sort( srcPacks, Comparator.comparing( DfsPackFile::getPackDescription, DfsPackDescription.objectLookupComparator())); rw = new RevWalk(ctx); added = rw.newFlag("ADDED"); //$NON-NLS-1$ isBase = rw.newFlag("IS_BASE"); //$NON-NLS-1$ List<RevObject> baseObjects = new BlockList<>(); pm.beginTask(JGitText.get().countingObjects, ProgressMonitor.UNKNOWN); for (DfsPackFile src : srcPacks) { List<ObjectIdWithOffset> want = toInclude(src, ctx); if (want.isEmpty()) continue; PackReverseIndex rev = src.getReverseIdx(ctx); DfsObjectRepresentation rep = new DfsObjectRepresentation(src); for (ObjectIdWithOffset id : want) { int type = src.getObjectType(ctx, id.offset); RevObject obj = rw.lookupAny(id, type); if (obj.has(added)) continue; pm.update(1); pw.addObject(obj); obj.add(added); src.representation(rep, id.offset, ctx, rev); if (rep.getFormat() != PACK_DELTA) continue; RevObject base = rw.lookupAny(rep.getDeltaBase(), type); if (!base.has(added) && !base.has(isBase)) { baseObjects.add(base); base.add(isBase); } } } for (RevObject obj : baseObjects) { if (!obj.has(added)) { pm.update(1); pw.addObject(obj); obj.add(added); } } pm.endTask(); } private List<ObjectIdWithOffset> toInclude(DfsPackFile src, DfsReader ctx) throws IOException { PackIndex srcIdx = src.getPackIndex(ctx); List<ObjectIdWithOffset> want = new BlockList<>( (int) srcIdx.getObjectCount()); SCAN: for (PackIndex.MutableEntry ent : srcIdx) { ObjectId id = ent.toObjectId(); RevObject obj = rw.lookupOrNull(id); if (obj != null && (obj.has(added) || obj.has(isBase))) continue; for (ObjectIdSet e : exclude) if (e.contains(id)) continue SCAN; want.add(new ObjectIdWithOffset(id, ent.getOffset())); } Collections.sort(want, (ObjectIdWithOffset a, ObjectIdWithOffset b) -> Long.signum(a.offset - b.offset)); return want; } private static void writePack(DfsObjDatabase objdb, DfsPackDescription pack, PackWriter pw, ProgressMonitor pm) throws IOException { try (DfsOutputStream out = objdb.writeFile(pack, PACK)) { pw.writePack(pm, pm, out); pack.addFileExt(PACK); pack.setBlockSize(PACK, out.blockSize()); } } private static void writeIndex(DfsObjDatabase objdb, DfsPackDescription pack, PackWriter pw) throws IOException { try (DfsOutputStream out = objdb.writeFile(pack, INDEX)) { CountingOutputStream cnt = new CountingOutputStream(out); pw.writeIndex(cnt); pack.addFileExt(INDEX); pack.setFileSize(INDEX, cnt.getCount()); pack.setBlockSize(INDEX, out.blockSize()); pack.setIndexVersion(pw.getIndexVersion()); } } private void writeReftable(DfsObjDatabase objdb, DfsPackDescription pack, ReftableCompactor compact) throws IOException { try (DfsOutputStream out = objdb.writeFile(pack, REFTABLE)) { compact.setConfig(configureReftable(reftableConfig, out)); compact.compact(out); pack.addFileExt(REFTABLE); pack.setReftableStats(compact.getStats()); } } static ReftableConfig configureReftable(ReftableConfig cfg, DfsOutputStream out) { int bs = out.blockSize(); if (bs > 0) { cfg = new ReftableConfig(cfg); cfg.setRefBlockSize(bs); cfg.setAlignBlocks(true); } return cfg; } private static class ObjectIdWithOffset extends ObjectId { final long offset; ObjectIdWithOffset(AnyObjectId id, long ofs) { super(id); offset = ofs; } } }